Serveur d'exploration H2N2

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Influenza A virus environmental stability : influence of viral proteins

Identifieur interne : 000036 ( France/Analysis ); précédent : 000035; suivant : 000037

Influenza A virus environmental stability : influence of viral proteins

Auteurs : Thomas Labadie [France]

Source :

RBID : Hal:tel-02173339

Descripteurs français

English descriptors

Abstract

The transmission of Influenza A viruses (IAV), either airborne in mammals or oro-faecal in aquatic birds, submits viral particle to a wide range of environmental conditions. These environmental conditions modulate IAV survival outside the host, which is also dependent on the viral subtype or strains. To date, the molecular drivers of IAV environmental persistence remain to be identified. In order to identify IAV molecular drivers of the environmental persistence, we generated different reassortant viruses between two H1N1 viruses that do not have the same stability outside the host. To this purpose, we performed survival kinetic and compared the inactivation slope of generated reassortant viruses in our controlledenvironment, using a real time cell analysis system. Our results demonstrate that the hemagglutinin (HA) and the neuraminidase (NA) are the main viral segments driving IAV environmental persistence. In addition, mutations driving viral stability in the environment were identified in the HA and NA amino-acid sequences. We also demonstrated that synonymous mutations introduced in the HA, using a codon-optimization strategy, drive the environmental persistence of IAV. The HA stability at low pH, HA surface expression levels in infected cells and the number of calcium binding sites of the NA were alternately changed by the mutations described in our study, indicating that these are stability determinants of IAV survival outside the host. Then, the sequential events of viral entry were analysed with fluorescence microscopy assays, showing that viral particles being exposed for a long period in saline water at 35°C are still able to bind their cellular receptor whereas the HA-mediated fusion within the endosome is not possible anymore. These two steps of the viral cycle are mainly mediated by the HA protein. Altogether, these result highlight the importance of the HA and the NA proteins, driving the environmental persistence of IAV. Given the known diversity of these two proteins in nature, this arouses interest in studying IAV environmental persistence at a more global scale. Such study could improve our knowledge on IAV ecology and epidemiology. Epidemiologic and climatic data analyse of human seasonal influenza viruses during 5 years and from 13 countries revealed that H1N1 virus and H3N2 virus distribution differs according to the mean weekly temperature in these countries. We then compared the H1N1 virus and H3N2 virus persistence on stainless steel surface at 4 °C and 20 °C, and the preliminary results suggest that IAV seasonal subtypes distribution might be partly regulated by their stability according to the temperature


Url:


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

Hal:tel-02173339

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Influenza A virus environmental stability : influence of viral proteins</title>
<title xml:lang="fr">Stabilité du virus de la grippe dans l'environnement : influence des protéines virales</title>
<author>
<name sortKey="Labadie, Thomas" sort="Labadie, Thomas" uniqKey="Labadie T" first="Thomas" last="Labadie">Thomas Labadie</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-237998" status="VALID">
<idno type="RNSR">201321607J</idno>
<orgName>Environnement et Risques infectieux - Environment and Infectious Risks</orgName>
<orgName type="acronym">ERI</orgName>
<desc>
<address>
<addrLine>Département Infection et Epidémiologie, 28, rue du Docteur Roux, 75724 Paris Cedex 15</addrLine>
<country key="FR"></country>
</address>
<ref type="url">https://research.pasteur.fr/en/team/environment-and-infectious-risks/</ref>
</desc>
<listRelation>
<relation active="#struct-300027" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-300027" type="direct">
<org type="institution" xml:id="struct-300027" status="VALID">
<idno type="IdRef">027936643</idno>
<idno type="ISNI">0000 0001 2353 6535</idno>
<orgName>Institut Pasteur [Paris]</orgName>
<date type="start">1887-06-04</date>
<desc>
<address>
<addrLine>25-28, rue du docteur Roux, 75724 Paris cedex 15</addrLine>
<country key="FR"></country>
</address>
<ref type="url">https://www.pasteur.fr</ref>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">HAL</idno>
<idno type="RBID">Hal:tel-02173339</idno>
<idno type="halId">tel-02173339</idno>
<idno type="halUri">https://tel.archives-ouvertes.fr/tel-02173339</idno>
<idno type="url">https://tel.archives-ouvertes.fr/tel-02173339</idno>
<date when="2017-12-20">2017-12-20</date>
<idno type="wicri:Area/Hal/Corpus">000160</idno>
<idno type="wicri:Area/Hal/Curation">000160</idno>
<idno type="wicri:Area/Hal/Checkpoint">000041</idno>
<idno type="wicri:explorRef" wicri:stream="Hal" wicri:step="Checkpoint">000041</idno>
<idno type="wicri:Area/Main/Merge">000233</idno>
<idno type="wicri:Area/Main/Curation">000233</idno>
<idno type="wicri:Area/Main/Exploration">000233</idno>
<idno type="wicri:Area/France/Extraction">000036</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Influenza A virus environmental stability : influence of viral proteins</title>
<title xml:lang="fr">Stabilité du virus de la grippe dans l'environnement : influence des protéines virales</title>
<author>
<name sortKey="Labadie, Thomas" sort="Labadie, Thomas" uniqKey="Labadie T" first="Thomas" last="Labadie">Thomas Labadie</name>
<affiliation wicri:level="1">
<hal:affiliation type="laboratory" xml:id="struct-237998" status="VALID">
<idno type="RNSR">201321607J</idno>
<orgName>Environnement et Risques infectieux - Environment and Infectious Risks</orgName>
<orgName type="acronym">ERI</orgName>
<desc>
<address>
<addrLine>Département Infection et Epidémiologie, 28, rue du Docteur Roux, 75724 Paris Cedex 15</addrLine>
<country key="FR"></country>
</address>
<ref type="url">https://research.pasteur.fr/en/team/environment-and-infectious-risks/</ref>
</desc>
<listRelation>
<relation active="#struct-300027" type="direct"></relation>
</listRelation>
<tutelles>
<tutelle active="#struct-300027" type="direct">
<org type="institution" xml:id="struct-300027" status="VALID">
<idno type="IdRef">027936643</idno>
<idno type="ISNI">0000 0001 2353 6535</idno>
<orgName>Institut Pasteur [Paris]</orgName>
<date type="start">1887-06-04</date>
<desc>
<address>
<addrLine>25-28, rue du docteur Roux, 75724 Paris cedex 15</addrLine>
<country key="FR"></country>
</address>
<ref type="url">https://www.pasteur.fr</ref>
</desc>
</org>
</tutelle>
</tutelles>
</hal:affiliation>
<country>France</country>
</affiliation>
</author>
</analytic>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="mix" xml:lang="en">
<term>Hemagglutinin</term>
<term>Influenza</term>
<term>Molecular biology</term>
<term>Neuraminidase</term>
<term>Persistence</term>
<term>Reassortment</term>
<term>Reverse genetic</term>
<term>Stability</term>
<term>Virus</term>
</keywords>
<keywords scheme="mix" xml:lang="fr">
<term>Grippe</term>
<term>Persistence</term>
<term>Réassortiment</term>
<term>Stabilité</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<p>The transmission of Influenza A viruses (IAV), either airborne in mammals or oro-faecal in aquatic birds, submits viral particle to a wide range of environmental conditions. These environmental conditions modulate IAV survival outside the host, which is also dependent on the viral subtype or strains. To date, the molecular drivers of IAV environmental persistence remain to be identified. In order to identify IAV molecular drivers of the environmental persistence, we generated different reassortant viruses between two H1N1 viruses that do not have the same stability outside the host. To this purpose, we performed survival kinetic and compared the inactivation slope of generated reassortant viruses in our controlledenvironment, using a real time cell analysis system. Our results demonstrate that the hemagglutinin (HA) and the neuraminidase (NA) are the main viral segments driving IAV environmental persistence. In addition, mutations driving viral stability in the environment were identified in the HA and NA amino-acid sequences. We also demonstrated that synonymous mutations introduced in the HA, using a codon-optimization strategy, drive the environmental persistence of IAV. The HA stability at low pH, HA surface expression levels in infected cells and the number of calcium binding sites of the NA were alternately changed by the mutations described in our study, indicating that these are stability determinants of IAV survival outside the host. Then, the sequential events of viral entry were analysed with fluorescence microscopy assays, showing that viral particles being exposed for a long period in saline water at 35°C are still able to bind their cellular receptor whereas the HA-mediated fusion within the endosome is not possible anymore. These two steps of the viral cycle are mainly mediated by the HA protein. Altogether, these result highlight the importance of the HA and the NA proteins, driving the environmental persistence of IAV. Given the known diversity of these two proteins in nature, this arouses interest in studying IAV environmental persistence at a more global scale. Such study could improve our knowledge on IAV ecology and epidemiology. Epidemiologic and climatic data analyse of human seasonal influenza viruses during 5 years and from 13 countries revealed that H1N1 virus and H3N2 virus distribution differs according to the mean weekly temperature in these countries. We then compared the H1N1 virus and H3N2 virus persistence on stainless steel surface at 4 °C and 20 °C, and the preliminary results suggest that IAV seasonal subtypes distribution might be partly regulated by their stability according to the temperature</p>
</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
</country>
</list>
<tree>
<country name="France">
<noRegion>
<name sortKey="Labadie, Thomas" sort="Labadie, Thomas" uniqKey="Labadie T" first="Thomas" last="Labadie">Thomas Labadie</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/H2N2V1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000036 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000036 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    H2N2V1
   |flux=    France
   |étape=   Analysis
   |type=    RBID
   |clé=     Hal:tel-02173339
   |texte=   Influenza A virus environmental stability : influence of viral proteins
}}

Wicri

This area was generated with Dilib version V0.6.33.
Data generation: Tue Apr 14 19:59:40 2020. Site generation: Thu Mar 25 15:38:26 2021